Preheat oven to 350°F (180°C) and line a muffin tin with paper liners.
In a bowl, whisk together the flour, cocoa powder, baking powder, and salt to ensure even distribution.
In another bowl, combine the coconut oil, sugar, applesauce, and vanilla extract. Mix until smooth.
Gradually add the dry ingredients and plant-based milk to the wet ingredients, alternating between the two, and mixing continuously until you have a smooth batter.
Chop the vegan dark chocolate into small pieces and gently fold them into the batter, making sure they are evenly distributed.
Fill the muffin liners about three-quarters full with batter. Bake for 18-20 minutes, or until golden brown. Insert a toothpick to check for doneness.
While the cupcakes are baking, prepare the vegan chocolate ganache: in a bowl, mix the vegan heavy cream, powdered sugar, and melted vegan dark chocolate ganache until smooth and creamy.
Let the cupcakes cool completely, then decorate them with the chocolate ganache and vegan chocolate shavings or a dusting of cocoa powder.
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